Transcript: lnc-BAALC-1:1

Basic information

LNCipedia transcript ID: lnc-BAALC-1:1 
LNCipedia gene ID: lnc-BAALC-1
Location (hg38): chr8:103243545-103246332
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2742 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000507589; TCONS_00014543; NONHSAT128168
Alternative gene names: ENSG00000250720; XLOC_006898; linc-FZD6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.3245 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BAALC-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BAALC-1:1
3.1 lnc-BAALC-1:1
4.0 lnc-BAALC-1:1
4.1 lnc-BAALC-1:1
5.0 lnc-BAALC-1:1
5.1 lnc-COLEC10-75:1
5.2 lnc-BAALC-1:1