Transcript: lnc-BABAM2-2:1

Basic information

LNCipedia transcript ID: lnc-BABAM2-2:1 
LNCipedia gene ID: lnc-BABAM2-2
Ensembl Gene ID: ENSG00000270640
Ensembl Transcript ID: ENST00000604052
Location (hg38): chr2:28396815-28397110
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 296 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT069824; ENST00000604052.1
Alternative gene names: ENSG00000270640.1; RP11-373D23.2; AC104695.3; AC104695.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.0815 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BABAM2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BRE-2:1
4.0 lnc-BRE-2:1
4.1 lnc-BRE-2:1
5.0 lnc-BRE-2:1
5.1 lnc-SNX17-28:1
5.2 lnc-BABAM2-2:1