Transcript: lnc-BANK1-2:1

Basic information

LNCipedia transcript ID: lnc-BANK1-2:1 
LNCipedia gene ID: lnc-BANK1-2
RefSeq ID: NR_033874
Location (hg38): chr4:101347777-101348883
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 793 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_033874; NR_033874.1
Alternative gene names: FLJ20021


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.1925 non-coding 
CPAT coding probability 50.37% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BANK1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP001816.1.1-1:1
4.0 lnc-AP001816.1.1-1:1
4.1 lnc-AP001816.1.1-1:1
5.0 lnc-AP001816.1.1-1:1
5.1 lnc-C4orf17-26:1
5.2 lnc-BANK1-2:1