Transcript: lnc-BANP-14:1

Basic information

LNCipedia transcript ID: lnc-BANP-14:1 
LNCipedia gene ID: lnc-BANP-14
Location (hg38): chr16:88177289-88178447
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 409 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000563521.1; RP11-863P13.1-001; OTTHUMT00000430447.1; NONHSAT144359
Alternative gene names: ENSG00000260162.1; RP11-863P13.1; OTTHUMG00000175542.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.1454 non-coding 
CPAT coding probability 5.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BANP-14:1 no no no no

Available literature

  1. Yang (2015), Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy., BMC Cardiovasc Disord


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BANP-1:1
4.0 lnc-BANP-1:1
4.1 lnc-BANP-1:1
5.0 lnc-BANP-1:1
5.1 lnc-MAP1LC3B-27:1
5.2 lnc-BANP-14:1