Transcript: lnc-BANP-14:2

Basic information

LNCipedia transcript ID: lnc-BANP-14:2 
LNCipedia gene ID: lnc-BANP-14
Ensembl Gene ID: ENSG00000260162
Ensembl Transcript ID: ENST00000563521
Location (hg38): chr16:88177289-88178646
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 608 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000563521.2
Alternative gene names: ENSG00000260162.2; RP11-863P13.1; AC134312.2

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.1454 non-coding 
CPAT coding probability 5.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BANP-14:2 no no no no

Available literature

  1. Yang (2015), Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy., BMC Cardiovasc Disord

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BANP-1:8
4.0 lnc-BANP-1:8
4.1 lnc-BANP-1:8
5.0 lnc-BANP-1:8
5.1 lnc-MAP1LC3B-27:2
5.2 lnc-BANP-14:2