Transcript: lnc-BANP-14:3

Basic information

LNCipedia transcript ID: lnc-BANP-14:3 
LNCipedia gene ID: lnc-BANP-14
Location (hg38): chr16:88177336-88185947
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8535 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024507; NONHSAT144362
Alternative gene names: XLOC_011826; linc-ZNF469-3

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.7339 non-coding 
CPAT coding probability 23.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BANP-14:3 no no no no

Available literature

  1. Yang (2015), Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy., BMC Cardiovasc Disord

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BANP-1:1
3.1 lnc-BANP-1:2
4.0 lnc-BANP-1:2
4.1 lnc-BANP-1:2
5.0 lnc-BANP-1:2
5.1 lnc-MAP1LC3B-27:3
5.2 lnc-BANP-14:3