Transcript: lnc-BANP-14:4

Basic information

LNCipedia transcript ID: lnc-BANP-14:4 
LNCipedia gene ID: lnc-BANP-14
Location (hg38): chr16:88182821-88186744
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3842 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024904; NONHSAT144369
Alternative gene names: XLOC_011826; linc-ZNF469-3

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.588 non-coding 
CPAT coding probability 99.87% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BANP-14:4 no no no no

Available literature

  1. Yang (2015), Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy., BMC Cardiovasc Disord

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BANP-1:2
3.1 lnc-BANP-1:3
4.0 lnc-BANP-1:3
4.1 lnc-BANP-1:3
5.0 lnc-BANP-1:3
5.1 lnc-MAP1LC3B-27:4
5.2 lnc-BANP-14:4