Transcript: lnc-BANP-14:5

Basic information

LNCipedia transcript ID: lnc-BANP-14:5 
LNCipedia gene ID: lnc-BANP-14
Location (hg38): chr16:88184344-88186687
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2262 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024905; NONHSAT144370
Alternative gene names: XLOC_011826; linc-ZNF469-3

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.5656 non-coding 
CPAT coding probability 99.77% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BANP-14:5 no no no no

Available literature

  1. Yang (2015), Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy., BMC Cardiovasc Disord

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BANP-1:3
3.1 lnc-BANP-1:4
4.0 lnc-BANP-1:4
4.1 lnc-BANP-1:4
5.0 lnc-BANP-1:4
5.1 lnc-MAP1LC3B-27:5
5.2 lnc-BANP-14:5