Transcript: lnc-BANP-1:15

Basic information

LNCipedia transcript ID: lnc-BANP-1:15 
LNCipedia gene ID: lnc-BANP-1
Ensembl Gene ID: ENSG00000260166
Ensembl Transcript ID: ENST00000566155
Location (hg38): chr16:88087387-88087932
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 213 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000566155.1; RP11-863P13.6-001; OTTHUMT00000430444.1; NONHSAT144347
Alternative gene names: ENSG00000260166.1; RP11-863P13.6; OTTHUMG00000175540.1; AC134312.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BANP-1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF469-1:1
4.0 lnc-ZNF469-1:1
4.1 lnc-ZNF469-1:1
5.0 lnc-ZNF469-1:1
5.1 lnc-MAP1LC3B-25:7
5.2 lnc-BANP-1:15