Transcript: lnc-BANP-1:9

Basic information

LNCipedia transcript ID: lnc-BANP-1:9 
LNCipedia gene ID: lnc-BANP-1
Location (hg38): chr16:88087056-88087932
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 544 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260166.1|ENST00000566155.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.7209 non-coding 
CPAT coding probability 15.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BANP-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF469-1:5
5.0 lnc-ZNF469-1:5
5.1 lnc-MAP1LC3B-25:1
5.2 lnc-BANP-1:9