Transcript: lnc-BATF3-6:4

Basic information

LNCipedia transcript ID: lnc-BATF3-6:4 
LNCipedia gene ID: lnc-BATF3-6
Location (hg38): chr1:212558555-212558988
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 434 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000093307.1|FTMT20200011624.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 22.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BATF3-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BATF3-6:4
5.0 lnc-BATF3-6:4
5.1 lnc-IRF6-52:3
5.2 lnc-BATF3-6:4