Transcript: lnc-BAZ2B-1:2

Basic information

LNCipedia transcript ID: lnc-BAZ2B-1:2 
LNCipedia gene ID: lnc-BAZ2B-1
Ensembl Gene ID: ENSG00000226266
Ensembl Transcript ID: ENST00000418770
Location (hg38): chr2:159670712-159712018
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 375 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000418770.1; AC009961.3-002; OTTHUMT00000333765.1; NONHSAT075118; ENST00000418770.5
Alternative gene names: ENSG00000226266.1; AC009961.3; OTTHUMG00000154081.1; ENSG00000226266.2; ENSG00000226266.6; AC009961.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.4273 non-coding 
CPAT coding probability 2.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BAZ2B-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BAZ2B-1:2
4.0 lnc-BAZ2B-1:2
4.1 lnc-BAZ2B-1:2
5.0 lnc-BAZ2B-1:2
5.1 lnc-SCN9A-64:12
5.2 lnc-BAZ2B-1:2