Transcript: lnc-BBOX1-10:1

Basic information

LNCipedia transcript ID: lnc-BBOX1-10:1 
LNCipedia gene ID: lnc-BBOX1-10
Location (hg38): chr11:27463388-27596583
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 358 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_448_chr11:27484934-27618130_ovary
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BBOX1-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BBOX1-10:1
4.0 lnc-BBOX1-10:1
4.1 lnc-BBOX1-10:1
5.0 lnc-BBOX1-10:1
5.1 lnc-QSER1-55:1
5.2 lnc-BBOX1-10:1