Transcript: lnc-BCL3-1:2

Basic information

LNCipedia transcript ID: lnc-BCL3-1:2 
LNCipedia gene ID: lnc-BCL3-1
Location (hg38): chr19:44737605-44745951
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1145 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027578; NONHSAT066716
Alternative gene names: XLOC_013095; linc-BCL3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.3206 non-coding 
CPAT coding probability 2.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BCL3-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BCL3-1:2
3.1 lnc-BCL3-1:2
4.0 lnc-BCL3-1:2
4.1 lnc-BCL3-1:2
5.0 lnc-BCL3-1:2
5.1 lnc-APOE-12:2
5.2 lnc-BCL3-1:2