Transcript: lnc-BCL9L-2:1

Basic information

LNCipedia transcript ID: lnc-BCL9L-2:1 
LNCipedia gene ID: lnc-BCL9L-2
Location (hg38): chr11:118950868-118953443
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2576 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000584831.1; RP11-158I9.7-001; OTTHUMT00000447251.1; NONHSAT024528
Alternative gene names: ENSG00000264523.1; RP11-158I9.7; OTTHUMG00000179601.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.9131 non-coding 
CPAT coding probability 4.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BCL9L-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BCL9L-1:1
4.0 lnc-BCL9L-1:1
4.1 lnc-BCL9L-1:1
5.0 lnc-BCL9L-1:1
5.1 lnc-SLC37A4-11:1
5.2 lnc-BCL9L-2:1