Transcript: lnc-BEND7-5:2

Basic information

LNCipedia transcript ID: lnc-BEND7-5:2 
LNCipedia gene ID: lnc-BEND7-5
Location (hg38): chr10:13523924-13528545
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 281 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018890; NONHSAT011498
Alternative gene names: XLOC_008735; linc-BEND7-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.2382 non-coding 
CPAT coding probability 33.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BEND7-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FRMD4A-1:1
3.1 lnc-FRMD4A-1:1
4.0 lnc-BEND7-5:2
4.1 lnc-BEND7-5:2
5.0 lnc-BEND7-5:2
5.1 lnc-KLF6-159:2
5.2 lnc-BEND7-5:2