Transcript: lnc-BEST3-1:3

Basic information

LNCipedia transcript ID: lnc-BEST3-1:3 
LNCipedia gene ID: lnc-BEST3-1
Location (hg38): chr12:69713635-69738568
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2536 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00020213
Alternative gene names: XLOC_010123; linc-BEST3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -68.32 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BEST3-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BEST3-1:3
3.1 lnc-BEST3-1:3
4.0 lnc-BEST3-1:3
4.1 lnc-BEST3-1:3
5.0 lnc-BEST3-1:3
5.1 lnc-LRRC10-1:5
5.2 lnc-BEST3-1:3