Transcript: lnc-BEST4-1:3

Basic information

LNCipedia transcript ID: lnc-BEST4-1:3 
LNCipedia gene ID: lnc-BEST4-1
Location (hg38): chr1:44759124-44775846
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 616 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225721.1|ENST00000428791.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 184.7634 coding 
CPAT coding probability 11.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BEST4-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BEST4-1:3
5.0 lnc-BEST4-1:3
5.1 lnc-PRDX1-19:1
5.2 lnc-BEST4-1:3