Transcript: lnc-BHLHE41-3:1

Basic information

LNCipedia transcript ID: lnc-BHLHE41-3:1 
LNCipedia gene ID: lnc-BHLHE41-3
Ensembl Gene ID: ENSG00000256256
Ensembl Transcript ID: ENST00000544399
Location (hg38): chr12:25882955-25885855
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 486 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000544399; ENST00000544399.1; RP11-443N24.4-001; OTTHUMT00000402339.1; NONHSAT027364
Alternative gene names: ENSG00000256256; RP11-443N24.4; ENSG00000256256.1; OTTHUMG00000169125.1; AC019209.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.5741 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BHLHE41-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BHLHE41-2:1
3.1 lnc-BHLHE41-3:1
4.0 lnc-BHLHE41-3:1
4.1 lnc-BHLHE41-3:1
5.0 lnc-BHLHE41-3:1
5.1 lnc-WBP11-86:1
5.2 lnc-BHLHE41-3:1