Transcript: lnc-BIRC2-5:3

Basic information

LNCipedia transcript ID: lnc-BIRC2-5:3 
LNCipedia gene ID: lnc-BIRC2-5
Ensembl Gene ID: ENSG00000281655
Ensembl Transcript ID: ENST00000629499
Location (hg38): chr11:102681310-102683913
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 721 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000629499.1
Alternative gene names: ENSG00000281655.1; RP11-817J15.3; AP000851.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -82.0055 non-coding 
CPAT coding probability 5.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BIRC2-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-817J15.3.1-1:3
4.1 lnc-RP11-817J15.3.1-1:3
5.0 lnc-RP11-817J15.3.1-1:3
5.1 lnc-DYNC2H1-7:10
5.2 lnc-BIRC2-5:3