Transcript: lnc-BLID-6:1

Basic information

LNCipedia transcript ID: lnc-BLID-6:1 
LNCipedia gene ID: lnc-BLID-6
Location (hg38): chr11:121601109-121603562
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2454 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001pye_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.4745 non-coding 
CPAT coding probability 8.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BLID-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BLID-6:1
4.0 lnc-BLID-6:1
4.1 lnc-BLID-6:1
5.0 lnc-BLID-6:1
5.1 lnc-SLC37A4-56:1
5.2 lnc-BLID-6:1