Transcript: lnc-BLM-6:13

Basic information

LNCipedia transcript ID: lnc-BLM-6:13 
LNCipedia gene ID: lnc-BLM-6
Location (hg38): chr15:90846388-90848275
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1888 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT048426; FPKM1_group_10834_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.9864 non-coding 
CPAT coding probability 6.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BLM-6:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FURIN-6:1
4.0 lnc-FURIN-6:1
4.1 lnc-BLM-6:13
5.0 lnc-BLM-6:13
5.1 lnc-TTLL13P-28:12
5.2 lnc-BLM-6:13