Transcript: lnc-BMS1-96:1

Basic information

LNCipedia transcript ID: lnc-BMS1-96:1 
LNCipedia gene ID: lnc-BMS1-96
RefSeq ID: NR_134498
Location (hg38): chr10:42755142-42769621
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 627 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134498.1
Alternative gene names: LOC105378269


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 164.5939 coding 
CPAT coding probability 39.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BMS1-96:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-NPY4R2-96:1
5.1 lnc-NPY4R2-96:1
5.2 lnc-BMS1-96:1