Transcript: lnc-BNC2-16:1

Basic information

LNCipedia transcript ID: lnc-BNC2-16:1 
LNCipedia gene ID: lnc-BNC2-16
Ensembl Gene ID: ENSG00000285169
Ensembl Transcript ID: ENST00000643763
Location (hg38): chr9:16982723-16983459
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 219 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000643763.1
Alternative gene names: ENSG00000285169.1; AL358117.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -420.9029 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BNC2-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-FREM1-16:1
5.1 lnc-FREM1-16:1
5.2 lnc-BNC2-16:1