Transcript: lnc-BOD1-1:13

Basic information

LNCipedia transcript ID: lnc-BOD1-1:13 
LNCipedia gene ID: lnc-BOD1-1
RefSeq ID: NR_108027
Location (hg38): chr5:173707599-173746209
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 570 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_108027; NR_108027.1
Alternative gene names: LINC01484


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.6208 non-coding 
CPAT coding probability 2.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BOD1-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BOD1-1:13
4.0 lnc-BOD1-1:13
4.1 lnc-BOD1-1:13
5.0 lnc-BOD1-1:13
5.1 lnc-PDLIM7-62:18
5.2 lnc-BOD1-1:13