Transcript: lnc-BOD1-1:14

Basic information

LNCipedia transcript ID: lnc-BOD1-1:14 
LNCipedia gene ID: lnc-BOD1-1
Location (hg38): chr5:173719359-173726488
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2737 bp
Exons: 8
Sources: Nielsen et al.,2014
Alternative transcript names: l_3065_chr5:173146361-173150337_thyroid
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.0546 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BOD1-1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BOD1-1:14
4.0 lnc-BOD1-1:14
4.1 lnc-BOD1-1:14
5.0 lnc-BOD1-1:14
5.1 lnc-PDLIM7-62:27
5.2 lnc-BOD1-1:14