Transcript: lnc-BOD1-1:29

Basic information

LNCipedia transcript ID: lnc-BOD1-1:29 
LNCipedia gene ID: lnc-BOD1-1
Location (hg38): chr5:173744318-173746178
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1861 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253686.1|HBMT00001173104.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.6208 non-coding 
CPAT coding probability 4.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BOD1-1:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BOD1-1:29
5.0 lnc-BOD1-1:29
5.1 lnc-PDLIM7-62:24
5.2 lnc-BOD1-1:29