Transcript: lnc-BOD1-1:30

Basic information

LNCipedia transcript ID: lnc-BOD1-1:30 
LNCipedia gene ID: lnc-BOD1-1
Location (hg38): chr5:173705780-173746178
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5363 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253686.1|MICT00000293559.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.826 non-coding 
CPAT coding probability 1.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BOD1-1:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BOD1-1:30
5.0 lnc-BOD1-1:30
5.1 lnc-PDLIM7-62:19
5.2 lnc-BOD1-1:30