Transcript: lnc-BPY2C-4:2

Basic information

LNCipedia transcript ID: lnc-BPY2C-4:2 
LNCipedia gene ID: lnc-BPY2C-4
Location (hg38): chrY:56675832-56678602
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 776 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017659; NONHSAT139813
Alternative gene names: XLOC_008305; linc-SPRY3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BPY2C-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRYP4-3:1
3.1 lnc-PRYP4-4:1
4.0 lnc-PRYP4-4:1
4.1 lnc-PRYP4-4:1
5.0 lnc-PRYP4-4:1
5.1 lnc-DAZ1-161:1
5.2 lnc-BPY2C-4:2