Transcript: lnc-BRCA1-3:13

Basic information

LNCipedia transcript ID: lnc-BRCA1-3:13 
LNCipedia gene ID: lnc-BRCA1-3
Location (hg38): chr17:43165988-43170327
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1465 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267002.1|FTMT26500005934.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 30.5065 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRCA1-3:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BRCA1-3:13
5.0 lnc-BRCA1-3:13
5.1 lnc-BRCA1-3:13
5.2 lnc-BRCA1-3:13