Transcript: lnc-BRCA1-3:15

Basic information

LNCipedia transcript ID: lnc-BRCA1-3:15 
LNCipedia gene ID: lnc-BRCA1-3
Location (hg38): chr17:43148371-43170305
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 593 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267002.1|FTMT26500002016.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.1743 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRCA1-3:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BRCA1-3:15
5.0 lnc-BRCA1-3:15
5.1 lnc-BRCA1-3:15
5.2 lnc-BRCA1-3:15