Transcript: lnc-BRD1-21:2

Basic information

LNCipedia transcript ID: lnc-BRD1-21:2 
LNCipedia gene ID: lnc-BRD1-21
Location (hg38): chr22:49901471-49903149
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1532 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087443
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.1928 non-coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BRD1-21:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALG12-2:2
4.0 lnc-ALG12-2:2
4.1 lnc-ALG12-2:2
5.0 lnc-ALG12-2:2
5.1 lnc-BRD1-9:2
5.2 lnc-BRD1-21:2