Transcript: lnc-BRD7-6:1

Basic information

LNCipedia transcript ID: lnc-BRD7-6:1 
LNCipedia gene ID: lnc-BRD7-6
Ensembl Gene ID: ENSG00000275155
Ensembl Transcript ID: ENST00000615979
Location (hg38): chr16:49847018-49847632
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 615 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000615979.1
Alternative gene names: ENSG00000275155.1; CTD-2595P9.4; AC027348.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -165.7404 non-coding 
CPAT coding probability 2.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRD7-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-BRD7-6:1
4.1 lnc-BRD7-6:1
5.0 lnc-BRD7-6:1
5.1 lnc-CFAP20-146:1
5.2 lnc-BRD7-6:1