Transcript: lnc-BRF2-13:1

Basic information

LNCipedia transcript ID: lnc-BRF2-13:1 
LNCipedia gene ID: lnc-BRF2-13
Location (hg38): chr8:36966418-36981961
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1113 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014969; NONHSAT126023
Alternative gene names: XLOC_007051; linc-DUSP26-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -84.897 non-coding 
CPAT coding probability 6.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRF2-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-419C23.1.1-1:1
3.1 lnc-RP11-419C23.1.1-2:1
4.0 lnc-RP11-419C23.1.1-2:1
4.1 lnc-RP11-419C23.1.1-2:1
5.0 lnc-RP11-419C23.1.1-2:1
5.1 lnc-C8orf86-55:1
5.2 lnc-BRF2-13:1