Transcript: lnc-BRF2-9:5

Basic information

LNCipedia transcript ID: lnc-BRF2-9:5 
LNCipedia gene ID: lnc-BRF2-9
Location (hg38): chr8:37325645-37331929
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5209 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253123.2|MICT00000341990.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -30.8546 non-coding 
CPAT coding probability 5.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRF2-9:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-150O12.1.1-2:11
5.0 lnc-RP11-150O12.1.1-2:11
5.1 lnc-C8orf86-49:5
5.2 lnc-BRF2-9:5