Transcript: lnc-BRWD3-2:3

Basic information

LNCipedia transcript ID: lnc-BRWD3-2:3 
LNCipedia gene ID: lnc-BRWD3-2
Location (hg38): chrX:80273331-80310170
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 500 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT137720
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 48.9408 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BRWD3-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BRWD3-2:3
4.0 lnc-BRWD3-2:3
4.1 lnc-BRWD3-2:3
5.0 lnc-BRWD3-2:3
5.1 lnc-PHKA1-37:3
5.2 lnc-BRWD3-2:3