Transcript: lnc-BTBD17-1:2

Basic information

LNCipedia transcript ID: lnc-BTBD17-1:2 
LNCipedia gene ID: lnc-BTBD17-1
Location (hg38): chr17:74300622-74309790
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5638 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT055781
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 342.7806 coding 
CPAT coding probability 49.38% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BTBD17-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BTBD17-1:2
4.0 lnc-BTBD17-1:2
4.1 lnc-BTBD17-1:2
5.0 lnc-BTBD17-1:2
5.1 lnc-GRB2-31:2
5.2 lnc-BTBD17-1:2