Transcript: lnc-BTD-5:1

Basic information

LNCipedia transcript ID: lnc-BTD-5:1 
LNCipedia gene ID: lnc-BTD-5
Location (hg38): chr3:15556806-15558290
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1485 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000059268.1|FTMT21200000695.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -114.2076 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BTD-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BTD-5:1
5.0 lnc-BTD-5:1
5.1 lnc-MKRN2-39:1
5.2 lnc-BTD-5:1