Transcript: lnc-BTG3-2:1

Basic information

LNCipedia transcript ID: lnc-BTG3-2:1 
LNCipedia gene ID: lnc-BTG3-2
Location (hg38): chr21:17010005-17014217
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 372 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029084; NONHSAT081270
Alternative gene names: XLOC_014010; linc-NRIP1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.3641 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BTG3-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BTG3-2:1
3.1 lnc-BTG3-2:1
4.0 lnc-BTG3-2:1
4.1 lnc-BTG3-2:1
5.0 lnc-BTG3-2:1
5.1 lnc-N6AMT1-87:1
5.2 lnc-BTG3-2:1