Transcript: lnc-BTG3-4:2

Basic information

LNCipedia transcript ID: lnc-BTG3-4:2 
LNCipedia gene ID: lnc-BTG3-4
Ensembl Gene ID: ENSG00000237735
Ensembl Transcript ID: ENST00000444868
Location (hg38): chr21:16754519-16815688
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 438 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000444868.2
Alternative gene names: ENSG00000237735.2; AP000473.6; AF130359.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.7628 non-coding 
CPAT coding probability 4.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BTG3-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BTG3-4:2
4.0 lnc-BTG3-4:2
4.1 lnc-BTG3-4:2
5.0 lnc-BTG3-4:2
5.1 lnc-N6AMT1-90:2
5.2 lnc-BTG3-4:2