Transcript: lnc-BTRC-2:2

Basic information

LNCipedia transcript ID: lnc-BTRC-2:2 
LNCipedia gene ID: lnc-BTRC-2
Location (hg38): chr10:101283923-101286342
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 364 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000116207.1|FTMT23900033604.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -207.8534 non-coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BTRC-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BTRC-2:2
5.0 lnc-BTRC-2:2
5.1 lnc-SMC3-123:1
5.2 lnc-BTRC-2:2