Transcript: lnc-BUB3-4:17

Basic information

LNCipedia transcript ID: lnc-BUB3-4:17 
LNCipedia gene ID: lnc-BUB3-4
Location (hg38): chr10:123482981-123552732
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1063 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018846; NONHSAT016774
Alternative gene names: XLOC_008652; linc-GPR26-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.3356 non-coding 
CPAT coding probability 85.02% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BUB3-4:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR26-3:9
3.1 lnc-GPR26-4:9
4.0 lnc-GPR26-4:9
4.1 lnc-BUB3-4:17
5.0 lnc-BUB3-4:17
5.1 lnc-EDRF1-33:17
5.2 lnc-BUB3-4:17