Transcript: lnc-BUB3-4:24

Basic information

LNCipedia transcript ID: lnc-BUB3-4:24 
LNCipedia gene ID: lnc-BUB3-4
Location (hg38): chr10:123559851-123562203
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 524 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018847; NONHSAT016782
Alternative gene names: XLOC_008653; linc-GPR26-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.6007 non-coding 
CPAT coding probability 2.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BUB3-4:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR26-2:1
3.1 lnc-GPR26-3:1
4.0 lnc-GPR26-3:1
4.1 lnc-BUB3-4:24
5.0 lnc-BUB3-4:24
5.1 lnc-EDRF1-33:24
5.2 lnc-BUB3-4:24