Transcript: lnc-BUB3-4:5

Basic information

LNCipedia transcript ID: lnc-BUB3-4:5 
LNCipedia gene ID: lnc-BUB3-4
Location (hg38): chr10:123356441-123518468
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1600 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017720; NONHSAT016766
Alternative gene names: XLOC_008652; linc-GPR26-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.1359 non-coding 
CPAT coding probability 7.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BUB3-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR26-3:1
3.1 lnc-GPR26-4:1
4.0 lnc-GPR26-4:1
4.1 lnc-BUB3-4:5
5.0 lnc-BUB3-4:5
5.1 lnc-EDRF1-33:5
5.2 lnc-BUB3-4:5