Transcript: lnc-C12orf74-6:4

Basic information

LNCipedia transcript ID: lnc-C12orf74-6:4 
LNCipedia gene ID: lnc-C12orf74-6
Ensembl Gene ID: ENSG00000258100
Ensembl Transcript ID: ENST00000551571
Location (hg38): chr12:91362196-91368606
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 894 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000551571; ENST00000551571.1; RP11-121E16.1-001; OTTHUMT00000407165.1; NONHSAT029858
Alternative gene names: ENSG00000258100; RP11-121E16.1; ENSG00000258100.1; OTTHUMG00000170076.1; AC025035.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.8689 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C12orf74-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLLU1.1-6:2
3.1 lnc-CLLU1.1-6:2
4.0 lnc-CLLU1.1-6:2
4.1 lnc-CLLU1.1-6:2
5.0 lnc-CLLU1.1-6:2
5.1 lnc-C12orf74-6:2
5.2 lnc-C12orf74-6:4