Transcript: lnc-C16orf72-15:1

Basic information

LNCipedia transcript ID: lnc-C16orf72-15:1 
LNCipedia gene ID: lnc-C16orf72-15
Location (hg38): chr16:9623069-9625095
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1693 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT140472; FPKM1_group_11276_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.231 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C16orf72-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C16orf72-15:1
4.0 lnc-C16orf72-15:1
4.1 lnc-C16orf72-15:1
5.0 lnc-C16orf72-15:1
5.1 lnc-SMIM22-68:1
5.2 lnc-C16orf72-15:1