Transcript: lnc-C17orf113-1:1

Basic information

LNCipedia transcript ID: lnc-C17orf113-1:1 
LNCipedia gene ID: lnc-C17orf113-1
Location (hg38): chr17:42061239-42065365
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2085 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT053686
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1188.3096 coding 
CPAT coding probability 25.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C17orf113-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF385C-2:1
4.0 lnc-ZNF385C-2:1
4.1 lnc-ZNF385C-2:1
5.0 lnc-ZNF385C-2:1
5.1 lnc-BRCA1-35:1
5.2 lnc-C17orf113-1:1