Transcript: lnc-C17orf47-2:3

Basic information

LNCipedia transcript ID: lnc-C17orf47-2:3 
LNCipedia gene ID: lnc-C17orf47-2
Location (hg38): chr17:58524588-58528569
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3544 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT054965
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 469.5042 coding 
CPAT coding probability 5.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C17orf47-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTMR4-1:6
4.0 lnc-C17orf47-2:3
4.1 lnc-C17orf47-2:3
5.0 lnc-C17orf47-2:3
5.1 lnc-PTRH2-17:3
5.2 lnc-C17orf47-2:3