Transcript: lnc-C17orf62-1:2

Basic information

LNCipedia transcript ID: lnc-C17orf62-1:2 
LNCipedia gene ID: lnc-C17orf62-1
Ensembl Gene ID: ENSG00000265458
Ensembl Transcript ID: ENST00000578344
Location (hg38): chr17:82457366-82457699
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 210 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000578344.1; RP13-20L14.6-001; OTTHUMT00000443524.1; NONHSAT056711
Alternative gene names: ENSG00000265458.1; RP13-20L14.6; OTTHUMG00000178838.1; AC132938.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.3058 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C17orf62-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf62-1:2
4.0 lnc-C17orf62-1:2
4.1 lnc-C17orf62-1:2
5.0 lnc-C17orf62-1:2
5.1 lnc-CD7-15:6
5.2 lnc-C17orf62-1:2