Transcript: lnc-C17orf62-3:1

Basic information

LNCipedia transcript ID: lnc-C17orf62-3:1 
LNCipedia gene ID: lnc-C17orf62-3
Ensembl Gene ID: ENSG00000264812
Ensembl Transcript ID: ENST00000579188
Location (hg38): chr17:82400703-82401382
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 680 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000579188.1; RP13-20L14.4-001; OTTHUMT00000442907.2; NONHSAT056693
Alternative gene names: ENSG00000264812.1; RP13-20L14.4; OTTHUMG00000178680.2; AC132938.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 41.2273 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C17orf62-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf62-3:1
4.0 lnc-C17orf62-3:1
4.1 lnc-C17orf62-3:1
5.0 lnc-C17orf62-3:1
5.1 lnc-CD7-8:1
5.2 lnc-C17orf62-3:1